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yraN [2019-06-19 12:42:05]

similar to transcriptional regulator ([SW|LysR family])

locus

BSU26870

8.97

33.46 kDa

protein length

289 aa Sequence Blast

gene length

870 bp Sequence Blast

function

unknown

product

transcriptional regulator ([SW|LysR family])

essential

synonyms

Outlinks

KEGG BsubCyc SubtiList UniProt Expression Browser

Genomic Context

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categories

[category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates

2,745,594 2,746,463

The protein

Protein family

[SW|LysR family]

Structure

[PDB|5Z72] (B. amyloliquefaciens [protein|FE15A41A58A8177280817CA3825764C39185021A|CcpC], 36% identity)

Expression and Regulation

Operons

genes

[gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]-[gene|5AE18B11C9E13E5B121673955E01F1B1E8DB1637|yraO]

description

[Pubmed|22383849]

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Biological materials

Mutant

MGNA-A262 (yraN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/262 NBRP B. subtilis, Japan]

BKE26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA, downstream forward: _UP4_TAAAGTTATGATAGAATTTT

BKK26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA, downstream forward: _UP4_TAAAGTTATGATAGAATTTT

References

22383849